GWASのステップ
- JMP genomicsソフトウェアのマニュアル記事が使いやすい
- こちらがマニュアル
- あえてリストを抜き出せば
*Check Data Contents *Verify Gender of Samples *Subset and Reorder Genetic Data *Recode Genotypes *Recode Missing Genotypes *Flip Strand *SNP Power *Kinship Matrix *Relationship Matrix *Phenotype Summary *LD Block Creation *Linkage Disequilibrium *LD tagSNP Selection *Case-Control Association *PCA for Population Stratification *SNP-Trait Association *Imputed SNP-Trait Association *GWAS Meta-Analysis *Multiple SNP-Trait Association *Rare Variant Association *Haplotype Estimation