GWASのステップ

*Check Data Contents
*Verify Gender of Samples
*Subset and Reorder Genetic Data
*Recode Genotypes
*Recode Missing Genotypes
*Flip Strand
*SNP Power
*Kinship Matrix
*Relationship Matrix
*Phenotype Summary
*LD Block Creation
*Linkage Disequilibrium
*LD tagSNP Selection
*Case-Control Association
*PCA for Population Stratification
*SNP-Trait Association
*Imputed SNP-Trait Association
*GWAS Meta-Analysis
*Multiple SNP-Trait Association
*Rare Variant Association
*Haplotype Estimation